Shared search
Find US-based ML researchers who have published on transformer or diffusion architectures for protein structure prediction, not currently at Isomorphic Labs, DeepMind, or Chai Discovery, with a GitHub history in OpenFold, ESM, or Boltz forks.
57 results across 57 people
1
Kilian Fatras8y exp
Senior ML Research Scientist | Scaling Foundation Protein Language & Structure Models
United StatesRecently started
English (Full professional proficiency)French (Native or bilingual proficiency)Protein Language ModelLarge Language Models (LLM)+18
2
Justin Tam8y exp
Research Scientist | Deep Learning for Protein Science & Agentic AI | Moderna | LANL | PhD Candidate @ Lehigh | Open to Work
New York City Metropolitan Area· 1y at co.Possibly open
3
Rui Yin, PhD9y exp
AI Scientist & Team Lead at Absci. I build structure-based antibody design selection systems, and develop better protein folding models to improve the hit rate of de novo antibody design.
San Francisco Bay Area· 1y at co.
Chinese (Native or bilingual proficiency)English (Full professional proficiency)TeamworkLeadership+7
4
Qin Wang9y exp
Ph.D. in AI4Science with a strong publication record in Protein Structure Prediction.
United States· 3y at co.Possibly open
English (Full professional proficiency)Research and Development (R&D)Algorithm OptimizationMachine Learning+17
5
Sakib Ferdous10y exp
PhD, Chemical Engineering | MS, Artificial Intelligence | Digital Twin for Biological Systems | Reinforcement Learning | Protein Structure Modelling | Bio-aware ML | AI systems architect | Shipped ML in Production
Des Moines, Iowa, United States· 1y at co.
Cell CultureBioinformatics and Computational BiologyHerbicide Resistance ModelingMathematical Modeling+16
6
Akash Pandey8y exp
Ph.D. Candidate | ML for Proteins, XAI models
Evanston, Illinois, United States· 3y at co.Likely open
EnglishHindiTamil
7
Kurt Swanson18y exp
Project Lead advancing preclinical programs to first-in-human trials. Structure Biologist & Protein Engineer focused on AI-enabled drug discovery, therapeutic design, and decision-ready clinical strategies.
Greater Boston
Machine LearningProtein EngineeringAgentic WorkflowsGenerative AI+16
8
Frédéric Dreyer13y exp
Protein Design | Physics | Machine Learning
New York, New York, United StatesRecently started
English (Full professional proficiency)French (Native or bilingual proficiency)German (Full professional proficiency)Italian (Elementary proficiency)+31
9
Ewa Lis18y exp
Machine Learning / AI for Peptide and Protein Discovery
San Diego, California, United States· 12y at co.Likely open
FrenchPolishDrug DiscoveryPeptides+18
10
Alex Naka15y exp
Machine learning & protein engineering
San Diego, California, United States· 3y at co.Likely open
Computer VisionPyTorchSurvival AnalysisMonte Carlo Simulation+16
11
Andrew Favor9y exp
Machine learning researcher, developing deep learning tools for the de novo design of proteins, RNA, and more.
United StatesRecently started
RNA DesignMachine LearningProtein DesignPython+19
12
Sam G.14y exp
Machine Learning - Bioinformatics - Protein Engineering
Madison, Wisconsin, United States· 1y at co.
Machine LearningTransformersPythonBioinformatics+16
13
Jiangchuan Ye12y exp
Computational Biology, Machine Learning, Protein Engineering
Cambridge, Massachusetts, United StatesRecently started
English (Full professional proficiency)Chinese (Native or bilingual proficiency)Natural Language Processing (NLP)Stem Cell Technology+49
14
Rishi Jajoo17y exp
Computational Biology, High Throughput Screening, Machine Learning, Protein Design, Target Discovery
Brookline, Massachusetts, United StatesRecently started
Cell BiologyMolecular BiologyBiochemistryFluorescence Microscopy+16
15
Oscar Alvizo18y exp
Senior Director, Computational Biology | Machine Learning | Data Science | Project Manager | Protein Engineer
San Francisco Bay AreaRecently started
SpanishResearch ManagementPartner Relationship ManagementConfluence+43
16
Rajiv Dave27y exp
Product development leader creating protein ingredients that function and behaves like casein in some applications. This game changing invention is patented in the USA using data science and machine learning as enablers.
Bakersfield, California, United States· 1y at co.
Team LeadershipProject ManagementProduct DevelopmentLeadership Development+43
17
Oleksandr Narykov12y exp
Assistant Software Engineer with expertise in computational biology and machine learning, specializing in disease mechanism analysis and protein structure modeling.
Lemont, Illinois, United StatesRecently started
English (Professional working proficiency)Russian (Native or bilingual proficiency)Ukraine (Native or bilingual proficiency)Bioinformatics+19
18
Mohammad Abdulqader, PhD6y exp
Computational Biologist & Bioinformatics Scientist (PhD) | Machine Learning & Data Science for Protein Structure, Stability, and Omics | AI/ML, Structural Bioinformatics
Merced, California, United States· 1y at co.Recently started
Arabic (Professional working proficiency)English (Professional working proficiency)Protein StructureBiophysical Chemistry+18
19
Greg Cope29y exp
Ph.D. | Scientist | Machine Learning and AI | Bioinformatician | Software Engineer and Developer | Data Pipeline Development | End-to-End Developer | Scientific Software and Data Visualization | Protein Engineer
Menlo Park, California, United States
LeadershipSystems ThinkingSoftware DevelopmentDirected Evolution+16
20
Marissa Dolorfino5y exp
PhD student in Computational Medicine and Bioinformatics at the University of Michigan interested in protein structure and design, drug discovery, and machine learning.
D.O.E Computational Sciences Graduate Fellow
Cadillac, Michigan, United States· 2y at co.Likely open
Graduate LevelHigher Education ResearchPython (Programming Language)rosetta+8
21
Ed Miller21y exp
Vice President of Protein Structure Modeling at Schrödinger
New York, New York, United StatesRecently started
Computational ChemistryMolecular ModelingChemistryFortran+13
22
PP
Pramod Kumar, Ph.D.17y exp
Cryo-EM Structural Biologist | Protein Structure, Dynamics & Signaling | Molecular Dynamics | AI-Driven Drug Discovery | JAK-STAT Signaling | Ion Channels | Nucleocytoplasmic Transport
United States· 2y at co.
Hindi (Native or bilingual proficiency)Punjabi (Professional working proficiency)English (Full professional proficiency)Higher Education Teaching+46
24
Dan Whalen12y exp
Biochemistry | Assays | Enzymology | Structure | Biophysics | Protein Engineering & Production | Antibody Discovery
Redwood City, California, United StatesRecently started
Protein ExpressionMolecular BiologyGeneticsX-ray crystallography+16
25
Shayan Poordian10y exp
MS in Biochemistry | RNA biology, Deep Learning & Protein Engineering Expertise
La Jolla Shores, California, United States· 3y at co.Possibly open
Merve Demir, PhD11y exp
Protein biochemist and structural biologist advancing structure-based drug discovery
San Diego Metropolitan Area· 3y at co.Likely open
Mechanism Of Action StudiesMammalian Cell CultureAnalytical SkillsProblem Solving+16
David S.23y exp
Lead discovery protein biophysics, biochemistry | Binding/Inhibition assay development | Hit-to-Lead | SPR | Structure Biology
San Francisco Bay Area
EnglishHebrewSAR (Drug Development)Mechanism Of Action Studies+59
Nicholas Marshall19y exp
Head of Protein Sciences at Invenra | Early Development | bioprocess | Structure design | Antibody discovery
Greater Madison Area· 3y at co.Possibly open
Investigational New Drug Application (IND)ChemistryManufacturingand Controls (CMC)+17
Johnson Hsin-Hui Wu, Ph.D.13y exp
Biochemistry and Biophysics | Protein Biochemistry | Assay Development | Protein Structure | Biotech and Biopharma
United States· 7y at co.Likely open
Molecular BiologyProtein ExpressionProtein ChemistryProtein Crystallization+3
Shana W.3y exp
Bioprocess Development | mRNA & Protein Characterization | Building Structure from Ambiguity
San Diego, California, United States
Computational Fluid Dynamics (CFD)Ansys FluentProject PlanningLysis+16
MZ
Monica Zhang13y exp
Characterize biologics (proteins and antibodies) and AAV viral vector structures using LCMS/MS.
Develop, validate and transfer RP HPLC and CE methods.
Identify post-translational modifications in antibodies and AAV
Fremont, California, United States· 2y at co.
LCMSMSProtein PTMBiologics HPLCValidation+24
Wenzong Li17y exp
Project & People Manager| Protein & Metabolic Engineering | Structure Biology| High Throughput Design, Build &Screen| SynBio
Emeryville, California, United StatesRecently started
Chinese (Native or bilingual proficiency)English (Native or bilingual proficiency)Protein ProductionProtein Design+18
Eric T. Larson23y exp
Scientific Consultant | Structural Biology and Protein Science | Lead structurally-informed drug discovery initiatives from hit finding to development | Gene-to-Structure Pipelines | SBDD and FBDD | CRO Management
Cambridge, Massachusetts, United StatesRecently started
Protein ScienceStructure-Based Drug Design (SBDD)Construct DesignCRO Management+16
JK
Jin Kwang Kim13y exp
Expert in protein purification, X-ray crystallography, and small molecule drug discovery for structure-based design.
San Diego, California, United States· 3y at co.Likely open
BiophysicsMaestro/Glide/MOE/Live Design/DataWarrior/PyMolMaestroMOE+14
Chloe T.8y exp
Scientist | Rapid & Molecular Diagnostic | Protein Engineering- Structure and Function | Cell & gene therapy
San Diego, California, United States· 3y at co.
Chinese (Elementary proficiency)Korean (Elementary proficiency)Vietnamese (Native or bilingual proficiency)Molecular Genetics+19
Michele Tolbert, Ph.D.15y exp
mRNA Scientist @ Editas Medicine | RNA Therapeutics, Biophysics & Structure | Cell & Gene Therapy | Disordered Protein Enthusiast
Greater BostonRecently started
Protein ExpressionIsothermal Titration CalorimetryBioinformaticsStructural Biology+26
Brandon Chavez1y exp
Chemist I | Bachem | Biochemist
Experienced Biotechnology Research Assistant with Competence in HIV Protein Expression & Structure Analysis. Pharmacy Technician with Strong Clinical Insight.
Long Beach, California, United States· 1y at co.
Project ManagementLeadershipCommunicationData Analysis+38
Santosh Kuncha PhD13y exp
Drug Discovery | Aging & Disease Research | Structure and Molecular Cell Biologist | Protein Sciences
San Francisco Bay Area· 1y at co.
BiophysicsProtein-protein InteractionsProtein EngineeringProtein Characterization+16
Saurav Misra21y exp
Protein Scientist @ Invaio Sciences (Biochemistry | Biomolecular Structure | Protein Design | Protein Analytical Science | Biologics R&D)
Manhattan, Kansas, United States· 1y at co.
Analytical SkillsScientific BackgroundResearch and Development (R&D)Protein Science+40
Anne Jecrois, PhD17y exp
Lover of proteins and structures
Greater BostonRecently started
FrenchHaitian CreoleEnglishAnalytical Skills+40
Peter Suon11y exp
Biochemistry/Molecular Biology, Protein structure & design
West Sacramento, California, United States· 3y at co.Possibly open
EnglishSpanish (Limited working proficiency)Cambodian (Elementary proficiency)Affinity Chromatography+26
Arijit Dutta, Ph.D.16y exp
Driving Next-Generation Genome Editing Technologies through CryoEM and Structure-guided Protein Engineering
Carlsbad, California, United StatesRecently started
BengaliEnglishHindiEnzymology+19
Suvarsha Rao Matukumalli15y exp
Freelance Editor | Protein Biologist | PhD in Biochemistry, Protein structure-function studies
Union City, California, United States· 1y at co.
English (Full professional proficiency)Hindi (Native or bilingual proficiency)Telugu (Native or bilingual proficiency)University Lecturing+19
Sesh G.12y exp
Protein Scientist + AI | Process Development, Computational Biology & Scale-Up | LDC, Impossible Foods
San Francisco Bay Area· 1y at co.
EnglishHindiMalayalamTamil+20
TM
Teshome M.
Chief Innovation Officer at Beyond Meat | Plant-Based R&D Leader | Alternative Protein Strategist | Asia Market Executive
El Segundo, California, United States
Sensory & Consumer ScienceProduct CommercializationR&D Strategy and LeadershipAlternative Protein Technologies+2
Robert Zonneveld35y exp
COO/CFO Advisory Board - Agriculture, Food and Protein - International Operations -Publicly Traded, Private Equity, Closely Held companies
Greater Tucson Area· 12y at co.Likely open
Critical ThinkingCoaching & MentoringGenerally Accepted Accounting Principles (GAAP)Financial Accounting+16
Lucas F. Ribeiro22y exp
Protein Engineering Scientist & Scientific Leader | Gene Editing, Directed Evolution, Machine Learning-Guided Engineering & Therapeutic Development
Raleigh-Durham-Chapel Hill AreaRecently started
EnglishPortugueseProtein EngineeringHigh Throughput Screening+18
Marcin Ura, PhD23y exp
Protein Engineering | AI/Machine Learning | Directed Evolution | Antibody Discovery
Vancouver, Washington, United StatesRecently started
English (Native or bilingual proficiency)German (Native or bilingual proficiency)Polish (Native or bilingual proficiency)Molecular Modeling+19
Wayland Yeung, PhD10y exp
Protein Engineering | Machine Learning | Data Engineering | Computational Biology
Athens, Georgia, United States
PostgreSQLGROMACSPythonDeep Learning+16
Daniel Piper2y exp
Research Associate I, Protein and Chemistry Machine Learning at Antares Therapeutics
Boston, Massachusetts, United States· 1y at co.
Big DataParallel AlgorithmsMachine LearningPython (Programming Language)+13
Rushath Rajeev16y exp
I’m studying biology, data, and machine learning to explore targeted medicine, artificial proteins, & antimicrobial resistance || Live healthier lives || Ex-Aviato Ex-PiedPiper
United StatesRecently started
German (Elementary proficiency)Small Business ConsultingProgrammingObject-Oriented Programming (OOP)+17
Jenni Keller16y exp
Bioinformatics | Machine Learning | Python | Protein Modeling | Genomics | RN
Great Falls, Montana, United StatesRecently started
Machine LearningProtein StructureComputational GenomicsJupyter+16
Chang-Hwa Chiang11y exp
Postdoctoral Researcher | Biocatalysis, Protein engineering, Directed evolution, Bioinformatics, Machine Learning, RNA
Greater Boston· 1y at co.
Mandarin (Native or bilingual proficiency)English (Full professional proficiency)
Olusola Olagunju10y exp
PhD Candidate in Grain Science | Machine Learning for Food Quality & Protein Functionality
Manhattan, Kansas, United States· 2y at co.
Protein PurificationComputer VisionMachine LearningResearch and Development (R&D)+16
Douglas Walker, PhD14y exp
Chemist | Biophysicist | Machine Learning for Protein Design | Data-Driven Problem Solver | Communicating Complex Science with Clarity
Corvallis, Oregon, United StatesRecently started
EnglishPython (Programming Language)Publication PlanningScientific Communications+17
Salik Dahal, PhD14y exp
Scientist | Biologics, Drug-discovery | Protein & Enzymes Engineering |Machine Learning | Protein Biochemist | Downstream Bioprocessing | Manufacturing and Technology
United States· 3y at co.Likely open
Statistical Process Control (SPC)process characterizationUFDFJMP+52
Pritom Bose14y exp
PostDoc @UNR Chemistry | PhD in Mechanical Engineering @RPI | In-silico Protein Dynamics | Molecular Modeling | Machine Learning | Mechanical Engineering
Reno, Nevada, United States· 1y at co.
High Performance Computing (HPC)ThroughputGitSolid Mechanics+13
Yuanzhang Zheng, PhD13y exp
Associate Director of Operations | AIDD & Protein Design | Machine Learning | From Gene to Therapeutics | U.S. Operations
New York City Metropolitan AreaRecently started
Chinese (Native or bilingual proficiency)English (Professional working proficiency)Operational ExecutionOperations Management+62